The best payroll for QuickBooks

Get payroll and accounting software that work better together. Our full-service payroll automates all of the tax filings and payments, and you can sync with QuickBooks in just a few clicks.

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  1. OnPay
  2. Payroll Software
  3. Integrations
  4. QuickBooks


Start with payroll that does it all for you

OnPay helps businesses save time and money, all while syncing straight to QuickBooks.

  • Automated taxes in all 50 states, plus 1099s and W-2s
  • Unlimited monthly pay runs
  • Manage multiple pay rates and types
  • Accuracy guaranteed on all filings
  • Pay by direct deposit, debit card, or check


Get the most flexible payroll integration

OnPay saves time and simplifies your finances by syncing automatically with each pay run. You’ll have more ways to connect QuickBooks Online or Desktop, and our payroll gets better reviews than QuickBooks.


Track expenses your way

No two businesses are the same, so we give you unprecedented flexibility to customize how your data is added to QuickBooks. Track wage expenses by Department, Pay Type, Class or Location. You can also set up custom reports in QuickBooks and see your finances in the way that makes the most sense for your business.


Spend less time in your back office

Utilize built-in HR

Send offer letters and have employees self-onboard. Plus, manage org charts, PTO, legal docs, and more.

Add benefits

Take care of your people with integrated health insurance or a retirement savings plan. The deductions sync seamlessly when you pay employees.

Integrated workers’ comp

Get all of your finances in one place with the best QuickBooks integrations. Even add pay-as-you-go Workers’ Comp.

See all features


Loved by small businesses

“OnPay takes a lot of administrative hassle off my mind. I also don’t have to worry anymore about what taxes are due when. My favorite things are the reliability and easy integration with QuickBooks.”


– David Rosenberg MD, VIPediatrics


Connect your accounts in a few clicks

  1. Sign up for OnPay and QuickBooks
    You’ll need to have accounts set up in OnPay and QuickBooks to use our integration.
  2. Sync your accounts
    Log in to OnPay, and sync your accounts in a few clicks. If you need them, we have detailed instructions for Quickbooks Desktop and QuickBooks Online.
  3. Live happily ever after
    That’s it! If you have any questions, our team is just a phone call, text, or email away.


Just $40 + $6 per active worker

One low monthly price for everything we do (and no hidden fees, ever):

  • No fees for integrations
  • Direct deposit, W-2s, and 1099s included
  • Top-rated, US-based customer support
  • Free setup and data migration


Try smarter payroll

  1. Set up an OnPay account in minutes
  2. We’ll handle any data migration to make it easy
  3. Run payroll (and we’ll take care of the taxes)
  4. Seamlessly sync with QuickBooks

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